Feb. 13, 2014: Rwanda – First Wheat Rust Surveys Undertaken

IMG_8072lrDuring the period 27th Jan – 1st Feb 2014 scientists from the Rwanda Agriculture Board (RAB), wheat program and CIMMYT-Ethiopia conducted wheat rust surveys and sampling in wheat growing areas of the Northern and Southern provinces. These surveys led by Innocent Habarurema (RAB) represent one of the first attempts to understand the status and population composition of wheat rusts in Rwanda. A total of 7 unique, dispersed locations (4 research stations and 3 farmer field sites – see Rwanda Survey Mapper) were included in the survey. yellow rust and stem rust predominated; with yellow rust being recorded at all locations surveyed and stem rust recorded at all but one location. Leaf rust was not common, only recorded at one location. Disease pressure was higher on research stations vs farmer fields, especially for stem rust. Given the importance of the region for emerging new races of both stem and yellow rust, a key priority of the surveys was sampling to determine which races of rust are currently present in Rwanda. Another important reason for surveys was the spore dispersal modelling work, undertaken by Cambridge University, UK, from the recent stem rust outbreak in Ethiopia.

IMG_8103lr

Stem Rust, Rwerere RS

Model predictions of spore dispersal from the Ethiopia stem rust outbreak indicate the potential for spore movement in a south-westerly direction, with a very low probability that spores may travel as far as Rwanda. Although Rwanda is at very low risk of any spore dispersal from Ethiopia, monitoring of the rust situation in the country was considered a priority in light of this recent outbreak. A total of 14 stem rust samples (live samples plus corresponding DNA samples) and 13 yellow rust samples were collected. The samples aimed to be representative of different geographical areas and different cultivars grown. Samples are currently undergoing analysis at the Cereals Disease Lab, Minnesota, USA and the Global Rust Reference Centre, Denmark and results will be forthcoming.

Jan. 20, 2014: DWR, India issues new yellow rust advisory for North-west plain zone and Northern Hill zone. Early appearance and rapid disease spread being reported.

India: Stripe Rust Summary, 15 Jan 2014

India: Stripe Rust Summary, 15 Jan 2014

On the 2nd January 2014 DWR, India issued a new advisory for yellow rust management in the North-west plain zone and Northern Hill zone (see DWR Advisory). The first report of stripe rust was observed in farmers fields on 1st Jan 2014 in the village of Rattangarh, Yamunanagar district, Haryana. This was a relatively early first appearance and due to conducive climatic conditions the disease is reported to be spreading quite quickly. On the 6th of January further reports of stripe rust were confirmed in the districts of Ropar and Hoshiarpur in Punjab. By the 15th January, 8 villages in Yamunanagar district, Haryana and 5 villages in Hoshiarpur and Ropar districts, Punjab had confirmed stripe rust outbreaks (see summary map). Due to conducive weather conditions further spread is expected.

DWR, India is advising wheat farmers to be extremely vigilant, actively monitor their crops and if stripe rust is detected then immediately spray with recommended fungicides.

ALERT – Dec 23, 2013: LOCALIZED STEM RUST EPIDEMIC IN SOUTHERN ETHIOPIA. EXTREME CAUTION AND VIGILANCE NEEDED IN EAST AFRICA AND MIDDLE EAST REGION

Fig 1: Farmer fields Gasera 26th Nov 2013. Left Digelu killed by stem rust; Right Digelu sprayed with Tilt (Photo: Bekele Abeyo, CIMMYT)

Fig 1: Farmer fields Gasera 26th Nov 2013. Left Digelu killed by stem rust; Right Digelu sprayed with Tilt (Photo: Bekele Abeyo, CIMMYT)

A severe, localised stem rust epidemic has broken out in southern Ethiopia during November-December 2013. The districts of Agarfa and Gasera in Bale zone are the most seriously affected, but some spread into other areas is now being reported. The previously resistant and popular cultivar “Digelu” is showing extreme susceptibility, with unsprayed crops exhibiting 100% incidence and 100% severity. Fields with, or close too, 100% loss have been observed (Fig. 1). It is estimated that approximately 10,000 ha of wheat in and around Agarfa and Gasera have been effected. Some effective control has been achieved by farmers who sprayed with registered and well tested fungicides. Research and government agencies in Ethiopia are very actively responding to the current situation.

Extensive sampling of stem rust has been undertaken in the affected areas; samples are currently undergoing analysis at EIAR’s Ambo Plant Protection Center, the Global Rust Reference Center, Denmark and the USDA-ARS Cereals Disease Lab, Minnesota. At the current moment in time no definitive information is available on the identity of the race(s) involved in the epidemic. Within the next few weeks confirmation of the causal race(s) should be determined.

Wheat production in the affected  area of Ethiopia is somewhat asynchronous with the rest of the country, so the majority of farmers in the surrounding wheat growing areas have already safely harvested the crop. However, some relatively small pocket areas do exist where wheat is still at a susceptible stage. These pocket areas are at risk and new reports of stem rust outbreaks are being received. All relevant institutions in Ethiopia are aware of the situation and control efforts are being targeted towards these new outbreak areas. The Arsi Robe district just to the north of the initial core epidemic area is now reporting high levels of stem rust, and stem rust outbreaks have occurred on a commercial farm (400 ha) in Guji zone, approximately 200km to the southwest of Agarfa and Gasera. Some geographic expansion within Ethiopia and continued spore production for several more weeks is therefore the most likely scenario.

Fig. 2. Risk Maps for Spore Deposition, Nov. 2013

Fig. 2. Risk Maps for Spore Deposition, Nov. 2013

To determine the potential risk in the surrounding region, comprehensive modelling of viable spore deposition from the Bale epidemic has been undertaken by the epidemiological modelling group at Cambridge University, UK led by Prof. Chris Gilligan. Initial results indicate that for spores released during November 2013, with an assumed 3 day spore lifetime, spore deposition has occurred predominantly to the South and South-West of the infected source locations in Ethiopia (Fig. 2 Top). Thus the majority of wheat growing regions in Ethiopia are at risk (fortunately most of these should be wheat-free at the current time), along with wheat areas to the south (Kenya, Uganda, Rwanda, and Tanzania); but areas to the North and East are not at risk. With an assumed 10 day spore lifetime, risk extends significantly into the Middle East (Fig. 2 Bottom). Thus, if wheat is present at a suitable growth stage and environmental conditions are suitable then these areas may be at risk if spores can remain viable for ten days. It should be noted that the dark blue areas on the spore deposition maps indicate very low risk, but they are not entirely risk free.

Based on current status and available information, close monitoring and contingency planning for possible outbreaks should be undertaken on any potentially receptive wheat crops in the following countries / regions: East Africa (Burundi, Ethiopia, Eritrea, Kenya, Rwanda, Sudan, Tanzania, Uganda); Middle East (Yemen, Saudi Arabia, southern Iraq, southern / western Iran).

This is an on-going situation and every attempt will be made to provide reliable, updated information on a regular basis.

Nov. 18, 2013: Eritrea Survey Summary – Stem rust predominates, but conditions favourable for all three rusts

Fig.1: Rust Frequency 2009-2013 in Eritrea

Fig.1: Rust Frequency 2009-2013 in Eritrea

Annual rust surveys, led by Asmelash Wolday of NARI,  during the period 3-15th October 2013 covered all the main wheat growing regions of Eritrea. A total of 69 sites were surveyed (see survey map – http://rusttracker.cimmyt.org/?page_id=1518).

As in previous years, stem rust predominated on the Eritrea surveys and the disease was widespread throughout the survey area. High frequency of stem rust in Eritrea has been a consistent trend for the last four years (see Fig. 1), only the drought year of 2009 stands out as being rust free. In 2013, stem rust was observed at 63 of the 69 sites surveyed (91%) with most sites (n=59) recording moderate (20-40%) or high (>40%) disease severity. A range of cereal crops were infected with stem rust, including; bread wheat, durum wheat, barley and wild oats. Extensive sampling was undertaken and samples are currently undergoing analysis at AAFC, Winnepeg, Canada and the Cereals Disease lab, Minnesota, USA.

Leaf and yellow rust were also widespread in Eritrea in 2013. Leaf rust was recorded at 49 of the sites surveyed (71%), with most sites (n=44) recording high (>40%) disease severity. Yellow rust was recorded at 33 of the sites surveyed (48%), with moderate or high disease severity recorded at 30 of the infected sites. Several yellow rust samples were collected and are currently undergoing analysis at the Global Rust Reference Center, Denmark.

Oct 10, 2013: Survey summary, Kenya 2013 – Stem rust predominates, but resistant cultivar “Kenya Robin” gaining popularity

Kenya Cultivars

Fig. 1: Kenya Cultivars – % of Survey Fields 2009-2013

During 2013 (Jan-Sept.) staff from KARI, Njoro, led by Ruth Wanyera, carried out extensive annual rust surveys throughout the Kenyan wheat growing areas. A total of 333 fields were surveyed for rusts. stem rust continues to be the predominant disease recorded on the Kenyan surveys; present in 160 of the 333 fields visited (48%). Stem rust was widespread – being observed in all the areas surveyed, but the Central Rift Valley region accounted for most of the high severity observations. Moderate (20-40%) or high (>40%) severity of stem rust was recorded in 84 of the fields visited. Favorable environmental conditions may have contributed to the relatively high severity of stem rust observed on the 2013 surveys. Yellow rust was only recorded in 22 of the fields visited (7%), with 12 of the infected fields showing moderate or high levels of severity. Similarly, leaf rust was only recorded in 21 fields (6%) and 11 of the infected fields had moderate or high disease severity.

Data on known cultivars recorded in the survey fields indicated that the recently released (2011, KARI release), high-yielding, rust-resistant cultivar “Kenya Robin” is gaining increasing popularity among Kenyan wheat farmers. “Kenya Robin” was observed in 51 of the 333 fields surveyed (15%), with a widespread distribution throughout the wheat growing areas. Comparison with equivalent survey data and known cultivars from 2009-2013 (Fig. 1) indicated that susceptible cultivars (“KS Mwamba” & “NJBWII“) still predominate, but the percentage of fields observed with the highly susceptible cultivar “KS Mwamba” appears to be declining.

June 25, 2013: Lebanon Survey Summary. Stem rust predominates

Photo credit: W Khoury, FAO

Photo: W Khoury, FAO

Surveys covering the main wheat growing areas in Lebanon from north to south were undertaken by Rola El Amil of the Lebanese Agricultural Research Institute (LARI) during the period 7-11th May 2013. A total of 24 locations were surveyed with all crops at the dough stage. stem rust was widespread throughout the survey areas, being recorded at 13 of the 24 locations (54%). High incidence and severity (>40%) of stem rust was recorded at 8 of these locations. Bread wheat, durum wheat and landraces were all  observed to be infected with stem rust. Both yellow and leaf rust were uncommon on the survey. Yellow rust was only recorded at 3 locations in the central and southern areas. Leaf rust was recorded at just 2 locations in the far north, close to the Syrian border.

June 24, 2013: Nepal Survey Summary. Yellow and leaf rust predominate

Nepal Rust Frequency 2011-2013

Nepal Rust Frequency 2011-2013

Extensive surveys were undertaken throughout Nepal during the period late March to mid May 2013. The surveys were coordinated by Sarala Sharma at NARC, Khumaltar with several participating institutes involved in implementation. A total of 102 locations were surveyed, covering the entire country from west to east and including the plains to the mid-high hills. yellow rust and leaf rust predominated on the survey.

Yellow rust was recorded at 58 of the locations visited (57%), with the disease widely distributed across Nepal throughout the mid hill areas. Only 1 observation was reported from the lowland Terai. Moderate or high severity (i.e., >20%) of yellow rust was recorded at 42 out of the 58 sites with disease.

Leaf rust was recorded at 52 of the locations visited (51%), with moderate or high severity recorded at 35 of these sites. As with yellow rust, leaf was distributed across Nepal but showed a bias towards the lowland plain areas. Compared to previous years (2011 & 2012) increased frequency and severity of leaf rust was observed in 2013 (see frequency graph).

stem rust was only recorded  at one location, near Nepalganj close to the Indian border. Low levels of stem rust were recorded on barley at this location.

Samples of all three rusts were collected and sent to the Shimla laboratory, India for race analysis.

June 15, 2013: DWR, India issues new yellow rust advisory for High Hills of Himachal Pradesh

yellow_rust_highOn the 10th of June 2013 DWR, India issued a new advisory for yellow rust management in the High Hills of Himachal Pradesh. Surveys by DWR and CSKHPKV Regional Research Centre, Bajoura in the first week of June in the Kullu district of Himachal Pradesh revealed high incidence and severity of yellow rust. The survey findings prompted fears that yellow rust infections in this area could serve as green bridge for other hill wheat areas and ultimately be a source of inoculum for the main season crop.  The importance of disease management in Himachal Pradesh during June-September was stressed as the impact of disease in these areas has serious implications for the main season crop in the high production areas of Punjab and Haryana. Farmers were advised to scout for yellow rust and control with recommended fungicides.

May 29, 2013: Initial rust surveys in Malawi reveal only low levels of leaf rust

malawi_surveyWheat is a minor crop in Malawi, however the geographical location situated between the wheat growing countries of East Africa and Southern Africa raises the question whether it acts as stepping stone for the movement of wheat rusts, especially stem rust, between the two regions. No prior information was available on the status of wheat rusts in Malawi, hence these surveys represent the first attempt to fill these information gaps.

Surveys were conducted during the period 23-27th May 2013 and covered the Central and Northern regions. The surveys were  organized by Donwell Kamalongo, Chitedze Research Station, Lilongwe with participation of scientists from Chitedze and Salima research stations and CIMMYT. A total of 12 fields were surveyed at widely dispersed sites close to Dedza, Tsangano, Ntchsi and Rumphi. Far less wheat was present on the ground than expected, with only the Tsangano area on the border with Mozambique holding any number of wheat fields. The variety SC Nduna was found to predominate in most areas. The only rusts found on the survey were in Tsangano with leaf rust being present at three locations on cultivars Kachibonga and Nduna. No stem or stripe rust were observed on the survey. Leaf rust samples were collected and sent to Prof. Zakkie Pretorius at the University of the Free State, South Africa for race analysis.

From evidence obtained on the survey it seems very unlikely that Malawi is playing any significant role in the possible movement of stem rust from East Africa to Southern Africa during this season. The virtual absence of wheat or rust and the separation of hundreds of kilometers between extremely small and isolated plots makes any stepping stone theory seem unlikely. It is probable that more wheat would be grown during the cool winter season under irrigation and follow up surveys are planned in late August/early September.

May 20, 2013: Bangladesh 2013 Rust Surveys – Leaf rust widespread, but at lower severity than in 2012

Bangladesh Severity Frequency

Bangladesh: Frequency of rust severity 2011–2013

Extensive rust surveys were undertaken throughout the wheat growing areas of Bangladesh during January-April 2013. The surveys were coordinated by Dr P.K. Malaker of the Wheat Research Centre, Dinajpur, but implemented by several collaborating stations, namely; Dinajpur, Joydebpur, Jamalpur, Jessore and Rajshahi. A total of  246 different locations  were  covered by the survey teams.

Only leaf rust, no stem or yellow rust, was observed on the 2013 surveys. Leaf rust was widespread and present in virtually all the areas surveyed. The disease was recorded at 41% (n=101) of the sites surveyed. Despite widespread incidence, severity of leaf rust was much lower than in the previous year. Only 4 sites reported high severity (>40%) of leaf rust in 2013, compared to 30 sites in 2012. Likewise only 33 sites reported moderate severity (20-40%) of leaf rust in 2013, compared to 43 sites in 2012.

Timely planted crops (15-30th November) largely escaped disease or had less disease compared to late planted crops. The cultivar Prodip was most affected by leaf rust showing low to high disease severities with a MS-S type reaction. Cultivars BARI Gom-25 and BARI Gom-26 exhibited only low disease severities with a MRMS-MSS type reaction. Five commercial cultivars; Shatabdi, Sourav,

Bijoy, BARI Gom-27 and BARI Gom-28 were free from leaf rust infection.